nigsp.blocks.plot_metric

nigsp.blocks.plot_metric(scgraph, outprefix, atlas=None, thr=None)

If possible, plot metrics as markerplot.

Parameters:

scgraphSCGraph object

The internal object containing all data.

outprefixstr

The prefix of the png file to export

img3DNiftiImage or None, optional

The nifti image of the atlas

atlas3D Nifti1Image, numpy.ndarray, or None, optional

Either a nifti image containing a valid atlas or a set of parcel coordinates.

thrfloat or None, optional

The threshold to use in plotting the nodes.